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kallisto | bustools & RNA Velocity

[Page still under construction.]

In the meantime please checkout this set of blog posts related to the paper “Melsted, Booeshaghi et al., Modular and efficient pre-processing of single-cell RNA-seq, bioRxiv, 2019“.

The posts are:

  1. Near-optimal pre-processing of single-cell RNA-seq
  2. Single-cell RNA-seq for dummies
  3. How to solve an NP-complete problem in linear time
  4. Rotating the knee (plot) and related yoga
  5. High velocity RNA velocity

For instructions on how to download, install, and use the kallisto | bustools workflow, please checkout https://www.kallistobus.tools/

Modular and efficient pre-processing workflow for Single-Cell RNA-Seq.